STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC68503.13-hydroxypropanoate dehydrogenase. (196 aa)    
Predicted Functional Partners:
SED18406.1
FMN reductase.
  
  
 0.836
SEC36641.1
FMN adenylyltransferase /riboflavin kinase; Belongs to the ribF family.
    
 0.811
xseB
Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
     
 0.805
SEE30032.1
Amino acid adenylation domain-containing protein.
  
 0.792
xseA
Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.718
SEE08999.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
    
 0.709
SEC68353.1
Amino acid/polyamine/organocation transporter, APC superfamily.
       0.694
SED33323.1
Uroporphyrinogen III methyltransferase / synthase.
  
 
 0.679
SED85123.1
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase.
    
 0.678
SED72894.1
NAD(P)H-dependent FMN reductase.
     
 0.672
Your Current Organism:
Streptomyces sp. 21311
NCBI taxonomy Id: 1855346
Other names: S. sp. 2131.1, Streptomyces sp. 2131.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.