Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEC74166.1 | SEC74507.1 | SAMN05216483_2309 | SAMN05216483_2316 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Uridine kinase. | 0.494 |
SEC74166.1 | SEC75853.1 | SAMN05216483_2309 | SAMN05216483_2344 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Thymidine phosphorylase. | 0.975 |
SEC74166.1 | SED92341.1 | SAMN05216483_2309 | SAMN05216483_4901 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Hypothetical protein. | 0.408 |
SEC74166.1 | SEE13311.1 | SAMN05216483_2309 | SAMN05216483_5430 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Uridine kinase. | 0.408 |
SEC74166.1 | guaA | SAMN05216483_2309 | SAMN05216483_2421 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.557 |
SEC74166.1 | tadA | SAMN05216483_2309 | SAMN05216483_3017 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.810 |
SEC74166.1 | upp | SAMN05216483_2309 | SAMN05216483_3014 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.934 |
SEC74507.1 | SEC74166.1 | SAMN05216483_2316 | SAMN05216483_2309 | Uridine kinase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.494 |
SEC74507.1 | SEC75853.1 | SAMN05216483_2316 | SAMN05216483_2344 | Uridine kinase. | Thymidine phosphorylase. | 0.597 |
SEC74507.1 | pyrF-2 | SAMN05216483_2316 | SAMN05216483_5397 | Uridine kinase. | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.902 |
SEC74507.1 | pyrH | SAMN05216483_2316 | SAMN05216483_1613 | Uridine kinase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.916 |
SEC74507.1 | pyrR | SAMN05216483_2316 | SAMN05216483_5390 | Uridine kinase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.908 |
SEC74507.1 | tadA | SAMN05216483_2316 | SAMN05216483_3017 | Uridine kinase. | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.859 |
SEC74507.1 | upp | SAMN05216483_2316 | SAMN05216483_3014 | Uridine kinase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.997 |
SEC75853.1 | SEC74166.1 | SAMN05216483_2344 | SAMN05216483_2309 | Thymidine phosphorylase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.975 |
SEC75853.1 | SEC74507.1 | SAMN05216483_2344 | SAMN05216483_2316 | Thymidine phosphorylase. | Uridine kinase. | 0.597 |
SEC75853.1 | SED92341.1 | SAMN05216483_2344 | SAMN05216483_4901 | Thymidine phosphorylase. | Hypothetical protein. | 0.585 |
SEC75853.1 | SEE13311.1 | SAMN05216483_2344 | SAMN05216483_5430 | Thymidine phosphorylase. | Uridine kinase. | 0.585 |
SEC75853.1 | guaA | SAMN05216483_2344 | SAMN05216483_2421 | Thymidine phosphorylase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.563 |
SEC75853.1 | pyrR | SAMN05216483_2344 | SAMN05216483_5390 | Thymidine phosphorylase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.914 |
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