STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED11930.1Hypothetical protein. (765 aa)    
Predicted Functional Partners:
SEC35130.1
Signal transduction histidine kinase.
    
 0.883
SED32014.1
DNA-directed RNA polymerase specialized sigma subunit, sigma24 family.
  
 
   0.857
SED11985.1
Putative peptidoglycan lipid II flippase.
 
     0.852
SED12166.1
Hypothetical protein.
 
     0.846
SED11887.1
poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.779
SED69399.1
Transcriptional attenuator, LytR family.
  
     0.758
SED50830.1
Sporulation and spore germination.
  
     0.756
SED94697.1
Hypothetical protein.
  
     0.751
SED96763.1
Hypothetical protein.
  
     0.744
SED49639.1
Hypothetical protein.
 
     0.731
Your Current Organism:
Streptomyces sp. 21311
NCBI taxonomy Id: 1855346
Other names: S. sp. 2131.1, Streptomyces sp. 2131.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.