Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SED17246.1 | SED17295.1 | SAMN05216483_3282 | SAMN05216483_3283 | Uncharacterized protein YxjI. | Thiol-disulfide isomerase or thioredoxin. | 0.806 |
SED17246.1 | SED17398.1 | SAMN05216483_3282 | SAMN05216483_3285 | Uncharacterized protein YxjI. | Hypothetical protein. | 0.572 |
SED17246.1 | SED65145.1 | SAMN05216483_3282 | SAMN05216483_4254 | Uncharacterized protein YxjI. | LPXTG-motif cell wall anchor domain-containing protein/TQXA domain-containing protein. | 0.404 |
SED17246.1 | SEE52424.1 | SAMN05216483_3282 | SAMN05216483_6507 | Uncharacterized protein YxjI. | Mannose-6-phosphate isomerase, cupin superfamily. | 0.572 |
SED17246.1 | apeB-2 | SAMN05216483_3282 | SAMN05216483_3286 | Uncharacterized protein YxjI. | Aspartyl aminopeptidase. | 0.559 |
SED17295.1 | SED17246.1 | SAMN05216483_3283 | SAMN05216483_3282 | Thiol-disulfide isomerase or thioredoxin. | Uncharacterized protein YxjI. | 0.806 |
SED17398.1 | SED17246.1 | SAMN05216483_3285 | SAMN05216483_3282 | Hypothetical protein. | Uncharacterized protein YxjI. | 0.572 |
SED17398.1 | apeB-2 | SAMN05216483_3285 | SAMN05216483_3286 | Hypothetical protein. | Aspartyl aminopeptidase. | 0.782 |
SED65145.1 | SED17246.1 | SAMN05216483_4254 | SAMN05216483_3282 | LPXTG-motif cell wall anchor domain-containing protein/TQXA domain-containing protein. | Uncharacterized protein YxjI. | 0.404 |
SEE52424.1 | SED17246.1 | SAMN05216483_6507 | SAMN05216483_3282 | Mannose-6-phosphate isomerase, cupin superfamily. | Uncharacterized protein YxjI. | 0.572 |
apeB-2 | SED17246.1 | SAMN05216483_3286 | SAMN05216483_3282 | Aspartyl aminopeptidase. | Uncharacterized protein YxjI. | 0.559 |
apeB-2 | SED17398.1 | SAMN05216483_3286 | SAMN05216483_3285 | Aspartyl aminopeptidase. | Hypothetical protein. | 0.782 |