Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEC48992.1 | SED40011.1 | SAMN05216483_1804 | SAMN05216483_3759 | Histidine kinase-like ATPase domain-containing protein; Manually curated. | Major Facilitator Superfamily protein. | 0.549 |
SEC48992.1 | SEE20444.1 | SAMN05216483_1804 | SAMN05216483_5613 | Histidine kinase-like ATPase domain-containing protein; Manually curated. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.472 |
SED39919.1 | SED40011.1 | SAMN05216483_3757 | SAMN05216483_3759 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Major Facilitator Superfamily protein. | 0.572 |
SED39919.1 | SED40071.1 | SAMN05216483_3757 | SAMN05216483_3761 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Penicillin amidase. | 0.572 |
SED39919.1 | mscL-2 | SAMN05216483_3757 | SAMN05216483_3755 | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | 0.688 |
SED40011.1 | SEC48992.1 | SAMN05216483_3759 | SAMN05216483_1804 | Major Facilitator Superfamily protein. | Histidine kinase-like ATPase domain-containing protein; Manually curated. | 0.549 |
SED40011.1 | SED39919.1 | SAMN05216483_3759 | SAMN05216483_3757 | Major Facilitator Superfamily protein. | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.572 |
SED40011.1 | SED40071.1 | SAMN05216483_3759 | SAMN05216483_3761 | Major Facilitator Superfamily protein. | Penicillin amidase. | 0.572 |
SED40011.1 | SEE20444.1 | SAMN05216483_3759 | SAMN05216483_5613 | Major Facilitator Superfamily protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.445 |
SED40011.1 | mscL-2 | SAMN05216483_3759 | SAMN05216483_3755 | Major Facilitator Superfamily protein. | Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | 0.569 |
SED40071.1 | SED39919.1 | SAMN05216483_3761 | SAMN05216483_3757 | Penicillin amidase. | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.572 |
SED40071.1 | SED40011.1 | SAMN05216483_3761 | SAMN05216483_3759 | Penicillin amidase. | Major Facilitator Superfamily protein. | 0.572 |
SEE20444.1 | SEC48992.1 | SAMN05216483_5613 | SAMN05216483_1804 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Histidine kinase-like ATPase domain-containing protein; Manually curated. | 0.472 |
SEE20444.1 | SED40011.1 | SAMN05216483_5613 | SAMN05216483_3759 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Major Facilitator Superfamily protein. | 0.445 |
mscL-2 | SED39919.1 | SAMN05216483_3755 | SAMN05216483_3757 | Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | 5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.688 |
mscL-2 | SED40011.1 | SAMN05216483_3755 | SAMN05216483_3759 | Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | Major Facilitator Superfamily protein. | 0.569 |