STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED68883.1dTDP-4-dehydrorhamnose 3,5-epimerase. (217 aa)    
Predicted Functional Partners:
SED68833.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 0.999
SED68778.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 0.993
SEE78709.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 0.993
SED68723.1
Glucose-1-phosphate thymidylyltransferase.
 
 0.977
SEE78687.1
Glucose-1-phosphate thymidylyltransferase.
 
 0.976
SEE14813.1
Mannose-1-phosphate guanylyltransferase / phosphomannomutase.
  
 0.909
SEE31883.1
Hypothetical protein.
  
  
 0.890
SED48375.1
UDPglucose 6-dehydrogenase.
  
  
 0.878
SEB77244.1
dTDP-L-rhamnose 4-epimerase.
  
 
 0.843
SEB79539.1
dTDP-glucose 4,6-dehydratase.
 
 
 0.843
Your Current Organism:
Streptomyces sp. 21311
NCBI taxonomy Id: 1855346
Other names: S. sp. 2131.1, Streptomyces sp. 2131.1
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