STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED87736.1Methyltransferase domain-containing protein. (252 aa)    
Predicted Functional Partners:
SED87708.1
Hypothetical protein.
 
     0.827
SED87764.1
Protein of unknown function.
       0.736
SED96468.1
Protoporphyrin IX magnesium-chelatase.
  
 0.733
SED87632.1
Putative membrane protein.
       0.716
SED87671.1
ABC transporter.
       0.716
SEC61943.1
Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family.
  
 
 0.707
SED87596.1
Transcriptional regulator, TetR family.
       0.701
SEC95021.1
Hypothetical protein.
    
 0.651
SEC23173.1
Cobaltochelatase CobN subunit.
 
 
 0.596
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.596
Your Current Organism:
Streptomyces sp. 21311
NCBI taxonomy Id: 1855346
Other names: S. sp. 2131.1, Streptomyces sp. 2131.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.