STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED88762.1Protein-disulfide isomerase. (281 aa)    
Predicted Functional Partners:
SED88790.1
Hypothetical protein.
       0.829
SED88821.1
Uncharacterized conserved protein, DUF2252 family.
       0.783
SED88860.1
DNA polymerase III, alpha subunit.
       0.708
SED80647.1
Alkaline phosphatase D.
       0.572
SEC72966.1
Hypothetical protein.
 
     0.559
SED87972.1
Hypothetical protein.
  
     0.556
SEE78503.1
Protein of unknown function.
  
 
 0.529
SED32014.1
DNA-directed RNA polymerase specialized sigma subunit, sigma24 family.
  
    0.518
SED69399.1
Transcriptional attenuator, LytR family.
  
     0.514
SEC51424.1
Hypothetical protein.
  
     0.501
Your Current Organism:
Streptomyces sp. 21311
NCBI taxonomy Id: 1855346
Other names: S. sp. 2131.1, Streptomyces sp. 2131.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.