STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE13381.1Hypothetical protein. (49 aa)    
Predicted Functional Partners:
SEE13346.1
Peptidase_C39 like family protein.
       0.741
SEE13311.1
Uridine kinase.
       0.687
SEE01488.1
Transcriptional regulator, TetR family; Manually curated.
       0.572
SEB85906.1
Hypothetical protein.
      
 0.474
SEC63794.1
Magnesium transporter.
      
 0.474
SED13269.1
Serine/threonine protein kinase.
      
 0.474
SED05941.1
Hypothetical protein.
      
 0.473
SED52208.1
Serine/threonine protein kinase.
      
 0.471
Your Current Organism:
Streptomyces sp. 21311
NCBI taxonomy Id: 1855346
Other names: S. sp. 2131.1, Streptomyces sp. 2131.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.