STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED50479.1Bifunctional DNA primase/polymerase, N-terminal. (221 aa)    
Predicted Functional Partners:
SED50425.1
ABC-2 type transport system permease protein.
 
     0.856
SED50540.1
Hypothetical protein.
 
     0.837
SED50441.1
ABC-2 type transport system ATP-binding protein.
       0.798
SED50508.1
Transcriptional regulator.
 
     0.788
SEE28299.1
LPXTG-motif cell wall anchor domain-containing protein.
  
     0.757
SED76759.1
ATP synthase protein I.
  
     0.751
SED37487.1
Hypothetical protein.
  
     0.732
SED29005.1
Hypothetical protein.
  
     0.727
SEC35517.1
Small secreted domain.
  
     0.726
SED23361.1
DNA-directed RNA polymerase specialized sigma subunit, sigma24 family.
  
     0.708
Your Current Organism:
Streptomyces sp. 22311
NCBI taxonomy Id: 1855347
Other names: S. sp. 2231.1, Streptomyces sp. 2231.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.