Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEC37406.1 | SEE65527.1 | SAMN05216532_1212 | SAMN05216532_8176 | D-sedoheptulose 7-phosphate isomerase. | Predicted nucleic-acid-binding protein, contains Zn-ribbon domain. | 0.768 |
| SEC80370.1 | SED36271.1 | SAMN05216532_2456 | SAMN05216532_4320 | Glutamate synthase (NADH) large subunit. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.449 |
| SEC80370.1 | SED40206.1 | SAMN05216532_2456 | SAMN05216532_4441 | Glutamate synthase (NADH) large subunit. | DNA polymerase III beta subunit, C-terminal domain. | 0.894 |
| SEC80370.1 | SED86310.1 | SAMN05216532_2456 | SAMN05216532_6017 | Glutamate synthase (NADH) large subunit. | Signal transduction histidine kinase. | 0.968 |
| SEC80370.1 | SEE65527.1 | SAMN05216532_2456 | SAMN05216532_8176 | Glutamate synthase (NADH) large subunit. | Predicted nucleic-acid-binding protein, contains Zn-ribbon domain. | 0.696 |
| SEC80370.1 | recF | SAMN05216532_2456 | SAMN05216532_4322 | Glutamate synthase (NADH) large subunit. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.683 |
| SED10476.1 | SED35201.1 | SAMN05216532_3448 | SAMN05216532_4288 | Protein of unknown function. | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.648 |
| SED10476.1 | SEE65527.1 | SAMN05216532_3448 | SAMN05216532_8176 | Protein of unknown function. | Predicted nucleic-acid-binding protein, contains Zn-ribbon domain. | 0.747 |
| SED18462.1 | SED35201.1 | SAMN05216532_3715 | SAMN05216532_4288 | Protein of unknown function. | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.648 |
| SED18462.1 | SEE65527.1 | SAMN05216532_3715 | SAMN05216532_8176 | Protein of unknown function. | Predicted nucleic-acid-binding protein, contains Zn-ribbon domain. | 0.747 |
| SED26162.1 | SED36271.1 | SAMN05216532_3985 | SAMN05216532_4320 | AAA domain-containing protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.490 |
| SED26162.1 | SEE65527.1 | SAMN05216532_3985 | SAMN05216532_8176 | AAA domain-containing protein. | Predicted nucleic-acid-binding protein, contains Zn-ribbon domain. | 0.747 |
| SED26162.1 | recF | SAMN05216532_3985 | SAMN05216532_4322 | AAA domain-containing protein. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.496 |
| SED35201.1 | SED10476.1 | SAMN05216532_4288 | SAMN05216532_3448 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Protein of unknown function. | 0.648 |
| SED35201.1 | SED18462.1 | SAMN05216532_4288 | SAMN05216532_3715 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Protein of unknown function. | 0.648 |
| SED35201.1 | SED36271.1 | SAMN05216532_4288 | SAMN05216532_4320 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.781 |
| SED35201.1 | SEE65527.1 | SAMN05216532_4288 | SAMN05216532_8176 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Predicted nucleic-acid-binding protein, contains Zn-ribbon domain. | 0.747 |
| SED35201.1 | recF | SAMN05216532_4288 | SAMN05216532_4322 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.704 |
| SED36271.1 | SEC80370.1 | SAMN05216532_4320 | SAMN05216532_2456 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Glutamate synthase (NADH) large subunit. | 0.449 |
| SED36271.1 | SED26162.1 | SAMN05216532_4320 | SAMN05216532_3985 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | AAA domain-containing protein. | 0.490 |
page 1 of 3