STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED31331.1Protein of unknown function. (200 aa)    
Predicted Functional Partners:
SED31364.1
Methyltransferase domain-containing protein.
       0.806
SED32537.1
Protein of unknown function.
 
     0.798
SED31292.1
Phage shock protein A (PspA) family protein.
       0.780
SEE62190.1
Protein of unknown function.
  
     0.767
SEC95385.1
MerR HTH family regulatory protein.
  
     0.759
rbpA
RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.758
SED31257.1
Hypothetical protein.
       0.752
SED31402.1
Serine protease, S1-C subfamily, contains C-terminal PDZ domain.
       0.747
SED57407.1
Single-strand DNA-binding protein.
  
     0.746
SEE62294.1
Protein of unknown function.
  
     0.730
Your Current Organism:
Streptomyces sp. 32133
NCBI taxonomy Id: 1855348
Other names: S. sp. 3213.3, Streptomyces sp. 3213.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.