STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE80460.13-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase. (372 aa)    
Predicted Functional Partners:
SEE80479.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.985
SEE80498.1
Protocatechuate 3,4-dioxygenase alpha subunit.
 
 
 0.974
SEE80521.1
Protocatechuate 3,4-dioxygenase beta subunit.
 
 
 0.974
SEE80552.1
3-oxoacid CoA-transferase subunit B.
  
 
 0.938
SEE80574.1
3-oxoacid CoA-transferase subunit A.
  
 
 0.921
SEC43024.1
Hydroxyquinol 1,2-dioxygenase.
 
 
 0.898
SEE50045.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.843
SEE80540.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.843
SED44616.1
Acetyl-CoA carboxylase beta subunit.
    
  0.841
SEE66639.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 0.838
Your Current Organism:
Streptomyces sp. 32133
NCBI taxonomy Id: 1855348
Other names: S. sp. 3213.3, Streptomyces sp. 3213.3
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