Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEF01931.1 | SEF01942.1 | SAMN05216533_5228 | SAMN05216533_5229 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.809 |
SEF01931.1 | SEF01963.1 | SAMN05216533_5228 | SAMN05216533_5231 | Serine/threonine protein kinase. | Hypothetical protein. | 0.635 |
SEF01931.1 | prfB | SAMN05216533_5228 | SAMN05216533_5230 | Serine/threonine protein kinase. | Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.675 |
SEF01942.1 | SEF01931.1 | SAMN05216533_5229 | SAMN05216533_5228 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.809 |
SEF01942.1 | SEF01963.1 | SAMN05216533_5229 | SAMN05216533_5231 | Serine/threonine protein kinase. | Hypothetical protein. | 0.657 |
SEF01942.1 | prfB | SAMN05216533_5229 | SAMN05216533_5230 | Serine/threonine protein kinase. | Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.726 |
SEF01963.1 | SEF01931.1 | SAMN05216533_5231 | SAMN05216533_5228 | Hypothetical protein. | Serine/threonine protein kinase. | 0.635 |
SEF01963.1 | SEF01942.1 | SAMN05216533_5231 | SAMN05216533_5229 | Hypothetical protein. | Serine/threonine protein kinase. | 0.657 |
SEF01963.1 | SEF11186.1 | SAMN05216533_5231 | SAMN05216533_6449 | Hypothetical protein. | Ribosome-associated heat shock protein Hsp15. | 0.671 |
SEF01963.1 | prfB | SAMN05216533_5231 | SAMN05216533_5230 | Hypothetical protein. | Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.755 |
SEF11186.1 | SEF01963.1 | SAMN05216533_6449 | SAMN05216533_5231 | Ribosome-associated heat shock protein Hsp15. | Hypothetical protein. | 0.671 |
prfB | SEF01931.1 | SAMN05216533_5230 | SAMN05216533_5228 | Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Serine/threonine protein kinase. | 0.675 |
prfB | SEF01942.1 | SAMN05216533_5230 | SAMN05216533_5229 | Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Serine/threonine protein kinase. | 0.726 |
prfB | SEF01963.1 | SAMN05216533_5230 | SAMN05216533_5231 | Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Hypothetical protein. | 0.755 |