Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEE35848.1 | SEF13963.1 | SAMN05216533_2064 | SAMN05216533_6942 | Hypothetical protein. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.754 |
| SEE35848.1 | SEF13972.1 | SAMN05216533_2064 | SAMN05216533_6944 | Hypothetical protein. | Predicted ferric reductase. | 0.750 |
| SEE35848.1 | SEF13980.1 | SAMN05216533_2064 | SAMN05216533_6946 | Hypothetical protein. | Predicted ferric reductase. | 0.755 |
| SEE35848.1 | argH | SAMN05216533_2064 | SAMN05216533_6953 | Hypothetical protein. | Argininosuccinate lyase. | 0.451 |
| SEF13958.1 | SEF13963.1 | SAMN05216533_6941 | SAMN05216533_6942 | Urease accessory protein. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.449 |
| SEF13963.1 | SEE35848.1 | SAMN05216533_6942 | SAMN05216533_2064 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein. | 0.754 |
| SEF13963.1 | SEF13958.1 | SAMN05216533_6942 | SAMN05216533_6941 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Urease accessory protein. | 0.449 |
| SEF13963.1 | SEF13968.1 | SAMN05216533_6942 | SAMN05216533_6943 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | FMN-binding domain-containing protein. | 0.959 |
| SEF13963.1 | SEF13972.1 | SAMN05216533_6942 | SAMN05216533_6944 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Predicted ferric reductase. | 0.882 |
| SEF13963.1 | SEF13976.1 | SAMN05216533_6942 | SAMN05216533_6945 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | FMN-binding domain-containing protein. | 0.938 |
| SEF13963.1 | SEF13980.1 | SAMN05216533_6942 | SAMN05216533_6946 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Predicted ferric reductase. | 0.854 |
| SEF13963.1 | SEF13985.1 | SAMN05216533_6942 | SAMN05216533_6947 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Two-component system, OmpR family, response regulator. | 0.402 |
| SEF13963.1 | SEF13989.1 | SAMN05216533_6942 | SAMN05216533_6948 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Two-component system, OmpR family, sensor kinase. | 0.494 |
| SEF13963.1 | SEF13998.1 | SAMN05216533_6942 | SAMN05216533_6950 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Pyridoxamine 5'-phosphate oxidase. | 0.563 |
| SEF13963.1 | argH | SAMN05216533_6942 | SAMN05216533_6953 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Argininosuccinate lyase. | 0.444 |
| SEF13968.1 | SEF13963.1 | SAMN05216533_6943 | SAMN05216533_6942 | FMN-binding domain-containing protein. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.959 |
| SEF13968.1 | SEF13972.1 | SAMN05216533_6943 | SAMN05216533_6944 | FMN-binding domain-containing protein. | Predicted ferric reductase. | 0.926 |
| SEF13968.1 | SEF13976.1 | SAMN05216533_6943 | SAMN05216533_6945 | FMN-binding domain-containing protein. | FMN-binding domain-containing protein. | 0.615 |
| SEF13968.1 | SEF13980.1 | SAMN05216533_6943 | SAMN05216533_6946 | FMN-binding domain-containing protein. | Predicted ferric reductase. | 0.893 |
| SEF13968.1 | SEF13985.1 | SAMN05216533_6943 | SAMN05216533_6947 | FMN-binding domain-containing protein. | Two-component system, OmpR family, response regulator. | 0.499 |
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