STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF14669.1Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family. (282 aa)    
Predicted Functional Partners:
SEF14661.1
Sensor histidine kinase inhibitor, KipI family.
 
    0.996
pxpA
UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
    0.986
SEF14657.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
 
    0.979
SEF13717.1
Urea carboxylase.
  
    0.964
SEF14673.1
Sugar phosphate permease.
  
    0.897
SEF14677.1
DNA-binding transcriptional regulator, GntR family.
 
     0.821
SEF14681.1
Hypothetical protein.
       0.689
SEF14684.1
Hypothetical protein.
       0.655
SEF14687.1
Hypothetical protein.
       0.640
SEF07833.1
Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase).
  
    0.559
Your Current Organism:
Streptomyces sp. Ag109O510
NCBI taxonomy Id: 1855349
Other names: S. sp. Ag109_O5-10, Streptomyces sp. Ag109_O5-10
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