STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC29724.1Dihydrolipoamide dehydrogenase. (462 aa)    
Predicted Functional Partners:
SEC29760.1
2-oxoglutarate dehydrogenase E2 component.
 0.999
SED16962.1
2-oxoglutarate dehydrogenase E1 component.
 
 0.999
SEC84006.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.994
SEC84029.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.994
SEC84360.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.994
SEC84386.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.994
SED55805.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.993
SEC84339.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
 
 0.977
SEC83982.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
 
 0.976
SED55771.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
 
 0.976
Your Current Organism:
Streptomyces sp. PANFS17
NCBI taxonomy Id: 1855351
Other names: S. sp. PAN_FS17, Streptomyces sp. PAN_FS17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.