STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC93594.1Protein of unknown function. (52 aa)    
Predicted Functional Partners:
SEC93618.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
  
    0.895
SEC93573.1
Arsenite efflux ATP-binding protein ArsA.
       0.784
SED13299.1
Protein of unknown function.
  
     0.771
SEC93551.1
Arsenite efflux ATP-binding protein ArsA.
       0.723
SEC94035.1
Helicase/secretion neighborhood CpaE-like protein.
  
     0.595
SEC93666.1
Glyoxylase, beta-lactamase superfamily II.
       0.549
SEC93689.1
Hypothetical protein.
       0.549
SEC93632.1
Nucleotidyltransferase domain-containing protein.
       0.452
SED30351.1
Protein of unknown function.
  
     0.450
SEC95916.1
Lsr2 protein.
  
     0.419
Your Current Organism:
Streptomyces sp. PANFS17
NCBI taxonomy Id: 1855351
Other names: S. sp. PAN_FS17, Streptomyces sp. PAN_FS17
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