STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED25516.1Glycerophosphoryl diester phosphodiesterase. (237 aa)    
Predicted Functional Partners:
SEC80282.1
Glycerophosphoryl diester phosphodiesterase.
 
  
0.923
SEC22117.1
Glycerophosphoryl diester phosphodiesterase.
 
  
0.910
SEB89948.1
Glycerophosphoryl diester phosphodiesterase; Manually curated.
 
  
 
0.908
SEC02534.1
Glycerophosphoryl diester phosphodiesterase.
 
  
 
0.906
SED04227.1
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.895
SEC06864.1
Glycerophosphoryl diester phosphodiesterase.
    
 0.882
SEC09806.1
Glycerol-3-phosphate dehydrogenase.
  
 0.880
SED25540.1
Adenosine deaminase.
       0.814
SEC04076.1
16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.808
SEC47181.1
Glycerophosphoryl diester phosphodiesterase.
    
 0.773
Your Current Organism:
Streptomyces sp. PANFS17
NCBI taxonomy Id: 1855351
Other names: S. sp. PAN_FS17, Streptomyces sp. PAN_FS17
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