STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED46429.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
SED46474.1
Protein of unknown function.
 
     0.713
SEC28156.1
Calcineurin-like phosphoesterase superfamily domain-containing protein.
  
     0.679
SEC81728.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
  
     0.627
SEC61567.1
Hypothetical protein.
  
     0.608
SED46379.1
Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
       0.603
SEC89632.1
Protein of unknown function.
  
     0.573
SEC48710.1
Protein of unknown function.
  
     0.569
SED54483.1
Nucleoside phosphorylase.
  
     0.549
SEC53811.1
Hypothetical protein.
  
     0.520
SED46400.1
ATPase components of ABC transporters with duplicated ATPase domains.
       0.504
Your Current Organism:
Streptomyces sp. PANFS17
NCBI taxonomy Id: 1855351
Other names: S. sp. PAN_FS17, Streptomyces sp. PAN_FS17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.