STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL07045.1Right handed beta helix region. (664 aa)    
Predicted Functional Partners:
SFK93012.1
alpha-N-arabinofuranosidase.
 
  
  0.873
SFK95889.1
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
  
  0.871
uxaC
Glucuronate isomerase.
  
  
  0.867
SFL41627.1
Glucan-binding repeat-containing protein.
  
  
  0.825
SFL18027.1
Beta-galactosidase.
     
 0.775
SFK99086.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
 0.732
SFL17752.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
   
 0.716
SFK59196.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.663
SFK85337.1
Protein of unknown function.
    
 
 0.613
SFL15316.1
Leucine rich repeat-containing protein.
  
  0.579
Your Current Organism:
Lachnospiraceae bacterium KH1T2
NCBI taxonomy Id: 1855374
Other names: L. bacterium KH1T2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.