STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP72590.1Hypothetical protein. (83 aa)    
Predicted Functional Partners:
SEP72631.1
Formate dehydrogenase major subunit.
       0.727
SEP72771.1
Formate-dependent nitrite reductase, membrane component NrfD.
       0.617
SEP72813.1
Hypothetical protein.
       0.578
SEP72683.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.569
SEP72725.1
Formate dehydrogenase iron-sulfur subunit.
       0.569
fdhD
FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
       0.474
Your Current Organism:
bacterium A52C2
NCBI taxonomy Id: 1855383
Other names: b. A52C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.