STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP74668.1Hypothetical protein. (689 aa)    
Predicted Functional Partners:
SEP74708.1
N-terminal double-transmembrane domain-containing protein.
 
     0.952
SEP74761.1
Protein of unknown function DUF58.
 
     0.952
SEP74801.1
MoxR-like ATPase.
 
     0.914
SEQ65314.1
TIGR02302 family protein.
  
     0.774
SEQ00417.1
Protein of unknown function.
  
     0.657
SER50842.1
Transcriptional regulator.
  
     0.642
SEP67825.1
Putative signal transducing protein.
  
     0.636
SEP74887.1
poly(A) polymerase/tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
     0.633
SEQ09856.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.596
SER64732.1
Helix-turn-helix.
  
     0.585
Your Current Organism:
bacterium A52C2
NCBI taxonomy Id: 1855383
Other names: b. A52C2
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