STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ10626.1Predicted transglutaminase-like cysteine proteinase. (202 aa)    
Predicted Functional Partners:
SEQ10590.1
PilZ domain-containing protein.
 
     0.791
SEP61271.1
Hypothetical protein.
  
     0.772
SEQ10870.1
Uncharacterized conserved protein, contains Zn-finger domain.
  
     0.770
SEQ10242.1
Hypothetical protein.
  
     0.763
SEP66655.1
Hypothetical protein.
  
     0.745
SEP58446.1
Uncharacterized membrane protein.
  
     0.742
SEP65591.1
Invasion protein IalB, involved in pathogenesis.
  
     0.738
SEQ35245.1
Apolipoprotein A1/A4/E domain-containing protein.
  
     0.730
SER07885.1
Invasion protein IalB, involved in pathogenesis.
  
     0.730
SEP68408.1
TIGR02301 family protein.
  
     0.726
Your Current Organism:
bacterium A52C2
NCBI taxonomy Id: 1855383
Other names: b. A52C2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.