STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ11623.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (249 aa)    
Predicted Functional Partners:
SER47474.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.958
SER47440.1
Amino acid adenylation domain-containing protein.
 
 0.900
SEQ36436.1
Acyl transferase domain-containing protein.
  
 0.869
SEQ11587.1
Membrane protein required for colicin V production.
 
     0.769
SER52307.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.740
SEQ22892.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.732
SEQ67005.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.727
SEQ34210.1
Rieske [2Fe-2S] domain-containing protein.
  
 
 0.722
SEQ23184.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.713
SER43123.1
Glutamate synthase (NADH) large subunit.
     
 0.708
Your Current Organism:
bacterium A52C2
NCBI taxonomy Id: 1855383
Other names: b. A52C2
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