STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ21015.1Peptide/nickel transport system permease protein. (302 aa)    
Predicted Functional Partners:
SEQ20970.1
Peptide/nickel transport system permease protein.
 
  0.957
SEQ21089.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.949
SEQ21049.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.942
SEQ20924.1
ABC-type transport system, substrate-binding protein.
 
  0.915
SEP84297.1
Peptide/nickel transport system permease protein.
 
 
  0.859
SEQ18054.1
Peptide/nickel transport system permease protein.
 
 
  0.858
SEQ72236.1
Peptide/nickel transport system permease protein.
 
 
  0.856
SER17345.1
Peptide/nickel transport system permease protein.
 
 
  0.856
SEQ19981.1
Peptide/nickel transport system permease protein.
 
 
  0.853
SER08716.1
Peptide/nickel transport system permease protein.
 
 
  0.851
Your Current Organism:
bacterium A52C2
NCBI taxonomy Id: 1855383
Other names: b. A52C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.