STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ96986.1Site-specific DNA recombinase. (487 aa)    
Predicted Functional Partners:
SEQ96918.1
Hypothetical protein.
 
     0.806
SEQ96952.1
Predicted transcriptional regulator.
 
     0.805
SEQ96874.1
Hypothetical protein.
       0.773
SEQ96839.1
Hypothetical protein.
 
     0.611
SEQ96795.1
P-type conjugative transfer protein TrbG.
 
     0.602
SEQ96745.1
Type IV secretion system protein VirB5.
 
     0.583
SEQ96715.1
Type IV secretion system protein TrbL.
 
     0.581
SEQ86461.1
Cytochrome c-type biogenesis protein.
  
    0.463
SER26465.1
ParB-like nuclease domain-containing protein.
 
  
 0.436
SER55954.1
Putative transposase.
 
   
 0.420
Your Current Organism:
bacterium A52C2
NCBI taxonomy Id: 1855383
Other names: b. A52C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.