STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN55532.1TonB-linked outer membrane protein, SusC/RagA family. (1127 aa)    
Predicted Functional Partners:
SEN55479.1
SusD family protein.
 
     0.945
SEM25874.1
SusD family protein.
  
     0.774
SEM26186.1
SusD family protein.
  
     0.774
SEM68091.1
SusD family protein.
  
     0.774
SEM72469.1
SusD family protein.
  
     0.774
SEN02255.1
SusD family protein.
  
     0.774
SEN99810.1
SusD family protein.
  
     0.774
SEM56008.1
RagB/SusD domain-containing protein.
  
     0.680
SEM66725.1
SusD family protein.
  
     0.621
SEM73716.1
SusD family protein.
  
     0.621
Your Current Organism:
bacterium A37T11
NCBI taxonomy Id: 1855384
Other names: b. A37T11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.