STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW27180.1Platelet-activating factor acetylhydrolase, isoform II. (367 aa)    
Predicted Functional Partners:
SEW27213.1
Transcriptional regulator, TetR family.
 
     0.806
SEW27160.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.773
SEW27135.1
Site-specific DNA-methyltransferase (adenine-specific)/adenine-specific DNA-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
       0.631
SEW27232.1
Putative efflux protein, MATE family.
       0.526
SEW04330.1
Phosphotransferase enzyme family protein.
  
    0.476
SEW36956.1
Hypothetical protein.
  
     0.467
SEW04468.1
NAD(P)H dehydrogenase (quinone).
  
     0.459
SEW08185.1
Lectin C-type domain-containing protein.
  
     0.433
Your Current Organism:
Ruminococcaceae bacterium KH2T8
NCBI taxonomy Id: 1855400
Other names: R. bacterium KH2T8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.