STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI78265.1Biopolymer transport protein exbD1; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates; Belongs to the ExbD/TolR family. (140 aa)    
Predicted Functional Partners:
ANI78263.1
Protein TolQ; Involved in the TonB-independent uptake of proteins; Belongs to the ExbB/TolQ family.
 
 
 0.981
ANI78262.1
Glyceraldehyde-3-phosphate dehydrogenase, testis-specific; May play an important role in regulating the switch between different pathways for energy production during spermiogenesis and in the spermatozoon. Required for sperm motility and male fertility (By similarity); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 
 0.873
ANI77974.1
Hypothetical protein; Involved in the TonB-independent uptake of proteins; Belongs to the ExbB/TolQ family.
 
 
 0.843
ANI78264.1
Biopolymer transport protein ExbD; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates; Belongs to the ExbD/TolR family.
 
    
0.809
ANI77742.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.652
ANI76706.1
Hypothetical protein.
  
 
 0.601
ANI77134.1
Hypothetical protein.
  
 
 0.601
ANI78670.1
Hypothetical protein.
  
 
 0.573
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
 
 0.572
ANI77339.1
Zinc finger protein ZIC; Acts as a transcriptional activator or repressor. Plays important roles in the early stage of organogenesis of the CNS. Activates the transcription of the serotonin transporter SERT in uncrossed ipsilateral retinal ganglion cells (iRGCs) to refine eye-specific projections in primary visual targets. Its transcriptional activity is repressed by MDFIC. Involved in the formation of the ipsilateral retinal projection at the optic chiasm midline. Drives the expression of EPHB1 on ipsilaterally projecting growth cones. Binds to the minimal GLI-consensus sequence 5'-TG [...]
  
 
 0.570
Your Current Organism:
Sphingobium sp. EP60837
NCBI taxonomy Id: 1855519
Other names: S. sp. EP60837
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