STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001984065_02702Unannotated protein. (158 aa)    
Predicted Functional Partners:
GCA_001984065_02703
Unannotated protein.
 
 
 0.984
GCA_001984065_04537
Unannotated protein.
   
  
 0.794
GCA_001984065_01050
Unannotated protein.
     
 0.714
GCA_001984065_03022
Unannotated protein.
 
  
 
0.687
GCA_001984065_05204
Unannotated protein.
     
 0.669
GCA_001984065_00813
Unannotated protein.
     
 0.630
GCA_001984065_00440
Unannotated protein.
   
  
 0.581
GCA_001984065_01257
Unannotated protein.
   
  
 0.581
GCA_001984065_01258
Unannotated protein.
   
  
 0.581
GCA_001984065_01912
Unannotated protein.
   
  
 0.581
Your Current Organism:
Pseudomonas sp. KK4
NCBI taxonomy Id: 1855729
Other names: P. sp. KK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.