STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
puuR_1HTH-type transcriptional regulator PuuR; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (168 aa)    
Predicted Functional Partners:
sinR_1
HTH-type transcriptional regulator SinR; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
  
 0.776
proP
Proline/betaine transporter; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
       0.541
rapL_1
L-lysine cyclodeaminase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
       0.527
cdr_1
Coenzyme A disulfide reductase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the sulfur carrier protein TusA family.
  
  
 0.475
cobB
NAD-dependent protein deacetylase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
    0.470
yvoA
HTH-type transcriptional repressor YvoA; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
  
 0.468
treR
Trehalose operon transcriptional repressor; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
  
 0.468
nadR_2
Trifunctional NAD biosynthesis/regulator protein NadR; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
   
    0.435
marA
Multiple antibiotic resistance protein MarA; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
 
 0.430
guaA
Glutamine amidotransferase type 1 domain-containing protein; Catalyzes the synthesis of GMP from XMP.
     
 0.420
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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