STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcr_1Bicyclomycin resistance protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (397 aa)    
Predicted Functional Partners:
bmr3
Multidrug resistance protein 3; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
     0.561
ldhD
D-lactate dehydrogenase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.547
emrB_1
Multidrug export protein EmrB; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the major facilitator superfamily.
 
     0.543
ARQ05834.1
tetR-type helix-turn-helix domain-containing family protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
       0.493
yecD
Isochorismatase family protein YecD; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
       0.486
nhoA
N-hydroxyarylamine O-acetyltransferase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the arylamine N-acetyltransferase family.
       0.485
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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