STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malLOligo-1,6-glucosidase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (557 aa)    
Predicted Functional Partners:
mapP
Maltose 6'-phosphate phosphatase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
 
 0.911
ARQ06144.1
Alpha-amylase precursor; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
     
 0.900
ARQ05958.1
GTP-binding protein YsxC; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
    0.752
treB
PTS system trehalose-specific EIIBC component; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
  
 0.698
glcB
PTS system glucoside-specific EIICBA component; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
  
 0.681
ptsG
PTS system glucose-specific EIICBA component; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
  
 0.681
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.571
amyX
Pullulanase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the glycosyl hydrolase 13 family.
  
 0.570
lutR_1
HTH-type transcriptional regulator LutR; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
       0.558
arcD
Arginine/ornithine antiporter; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
   
 0.521
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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