STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntdBKanosamine-6-phosphate phosphatase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (270 aa)    
Predicted Functional Partners:
ARQ05980.1
Acetyltransferase (GNAT) family protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
    0.777
glcU
Putative glucose uptake protein GlcU; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
     0.616
topB
DNA topoisomerase 3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
       0.574
gdhIV
Glucose 1-dehydrogenase 4; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
    0.493
citT
Citrate carrier; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
       0.403
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.