STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydjHPutative sugar kinase YdjH; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the carbohydrate kinase PfkB family. (295 aa)    
Predicted Functional Partners:
afr
1,5-anhydro-D-fructose reductase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
  
 0.840
manP
PTS system mannose-specific EIIBCA component; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
  
 0.724
ARQ06540.1
D-arabitol-phosphate dehydrogenase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
  
 0.647
yvyI
Putative mannose-6-phosphate isomerase YvyI; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the mannose-6-phosphate isomerase type 1 family.
     
 0.598
davD
Glutarate-semialdehyde dehydrogenase DavD; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the aldehyde dehydrogenase family.
  
  
 0.568
aldA
Putative aldehyde dehydrogenase AldA; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the aldehyde dehydrogenase family.
  
  
 0.568
rocA1
1-pyrroline-5-carboxylate dehydrogenase 1; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the aldehyde dehydrogenase family.
  
  
 0.568
alkH
Aldehyde dehydrogenase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the aldehyde dehydrogenase family.
  
  
 0.568
glcB
PTS system glucoside-specific EIICBA component; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
  
 0.514
ptsG
PTS system glucose-specific EIICBA component; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
  
 0.514
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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