STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrKPutative multidrug resistance protein EmrK; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (216 aa)    
Predicted Functional Partners:
emrB_2
Multidrug export protein EmrB; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the major facilitator superfamily.
 
 
 0.950
ARQ05863.1
FtsX-like permease family protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
  
 0.780
emrB_1
Multidrug export protein EmrB; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the major facilitator superfamily.
 
 
 0.740
emrY
Putative multidrug resistance protein EmrY; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the major facilitator superfamily.
 
 
 0.701
bmr3
Multidrug resistance protein 3; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
 
 0.669
ethR
HTH-type transcriptional regulator EthR; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
     
 0.560
ARQ06275.1
Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
       0.535
yccS
Inner membrane protein YccS; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
  
 0.480
cdr_1
Coenzyme A disulfide reductase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the sulfur carrier protein TusA family.
  
    0.447
secD
Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
     
 0.441
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.