STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nirQDenitrification regulatory protein NirQ; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (260 aa)    
Predicted Functional Partners:
ARQ06887.1
Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
  
 0.979
ARQ06889.1
Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
     0.803
brnQ_2
Branched-chain amino acid transport system 2 carrier protein; Component of the transport system for branched-chain amino acids.
  
    0.596
mhqA_4
Putative ring-cleaving dioxygenase MhqA; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
       0.551
ARQ07846.1
Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
     0.534
mtnW
2,3-diketo-5-methylthiopentyl-1-phosphate enolase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the RuBisCO large chain family.
 
   
 0.476
ARQ05860.1
Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
     0.468
ARQ07882.1
Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
 
   0.445
ARQ06946.1
Tetratricopeptide repeat protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
   
 0.420
ARQ06497.1
2',5' RNA ligase family; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the 2H phosphoesterase superfamily. YjcG family.
 
     0.417
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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