STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znuB_1High-affinity zinc uptake system membrane protein ZnuB; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (283 aa)    
Predicted Functional Partners:
znuC_1
High-affinity zinc uptake system ATP-binding protein ZnuC; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 0.996
znuA
High-affinity zinc uptake system binding-protein ZnuA precursor; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.978
znuC_2
High-affinity zinc uptake system ATP-binding protein ZnuC; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
 0.937
psaA
Manganese ABC transporter substrate-binding lipoprotein precursor; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the bacterial solute-binding protein 9 family.
  
 0.923
zinT
Metal-binding protein ZinT precursor; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
 
 0.900
fhuC
Iron(3+)-hydroxamate import ATP-binding protein FhuC; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
 
 0.895
zur_1
Zinc-specific metallo-regulatory protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the Fur family.
  
  
 0.830
nfo_1
Putative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
  
    0.641
cshB_1
DEAD-box ATP-dependent RNA helicase CshB; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures.
  
    0.608
mntB
Manganese transport system membrane protein MntB; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
  
 
0.509
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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