STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kynU_2Kynureninase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (420 aa)    
Predicted Functional Partners:
kynA_2
Tryptophan 2,3-dioxygenase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
  
 0.944
kynB_2
Kynurenine formamidase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
  
 0.916
kynA_1
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
 
  
 0.764
kynB_1
Kynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation.
 
  
 0.646
ARQ05823.1
Amidohydrolase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
  
 0.511
glyQS_2
Glycine--tRNA ligase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
       0.414
hpxO
FAD-dependent urate hydroxylase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
  
 0.411
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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