node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARQ07917.1 | misCB | MCCS_23370 | MCCS_21420 | Preprotein translocase subunit SecY; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. | Membrane protein insertase MisCB precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | 0.463 |
ARQ07917.1 | pheT_1 | MCCS_23370 | MCCS_17270 | Preprotein translocase subunit SecY; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. | Phenylalanine--tRNA ligase beta subunit; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.537 |
ARQ07917.1 | secD | MCCS_23370 | MCCS_16150 | Preprotein translocase subunit SecY; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. | Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.985 |
ARQ07917.1 | secE | MCCS_23370 | MCCS_24250 | Preprotein translocase subunit SecY; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.909 |
ARQ07917.1 | secG | MCCS_23370 | MCCS_07340 | Preprotein translocase subunit SecY; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.819 |
ARQ07917.1 | secY | MCCS_23370 | MCCS_03400 | Preprotein translocase subunit SecY; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.927 |
ARQ07917.1 | yidC | MCCS_23370 | MCCS_22560 | Preprotein translocase subunit SecY; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. | Membrane protein insertase YidC precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | 0.463 |
misCB | ARQ07917.1 | MCCS_21420 | MCCS_23370 | Membrane protein insertase MisCB precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | Preprotein translocase subunit SecY; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. | 0.463 |
misCB | secD | MCCS_21420 | MCCS_16150 | Membrane protein insertase MisCB precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.992 |
misCB | secE | MCCS_21420 | MCCS_24250 | Membrane protein insertase MisCB precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.495 |
misCB | secG | MCCS_21420 | MCCS_07340 | Membrane protein insertase MisCB precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.625 |
misCB | secY | MCCS_21420 | MCCS_03400 | Membrane protein insertase MisCB precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.586 |
misCB | yidC | MCCS_21420 | MCCS_22560 | Membrane protein insertase MisCB precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | Membrane protein insertase YidC precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | 0.907 |
pheT_1 | ARQ07917.1 | MCCS_17270 | MCCS_23370 | Phenylalanine--tRNA ligase beta subunit; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Preprotein translocase subunit SecY; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. | 0.537 |
pheT_1 | secD | MCCS_17270 | MCCS_16150 | Phenylalanine--tRNA ligase beta subunit; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.860 |
pheT_1 | secY | MCCS_17270 | MCCS_03400 | Phenylalanine--tRNA ligase beta subunit; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.537 |
queA | secD | MCCS_16180 | MCCS_16150 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.854 |
queA | tgt | MCCS_16180 | MCCS_16170 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.998 |
queA | yajC | MCCS_16180 | MCCS_16160 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Preprotein translocase subunit YajC; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. | 0.847 |
secD | ARQ07917.1 | MCCS_16150 | MCCS_23370 | Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | Preprotein translocase subunit SecY; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. | 0.985 |