STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARQ07417.1Cobalt-dependent inorganic pyrophosphatase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (433 aa)    
Predicted Functional Partners:
ARQ07418.1
Metal-dependent hydrolase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the UPF0173 family.
     
 0.718
ARQ07654.1
Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
     0.686
vraS
Sensor protein VraS; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
     0.542
hemN
Oxygen-independent coproporphyrinogen-III oxidase 1; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
     0.540
ARQ07419.1
Putative peptidase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the peptidase M24B family.
       0.523
vraR_2
Response regulator protein VraR; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
     0.519
ARQ06489.1
CYTH domain protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
     0.484
ARQ07420.1
CutC-like protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the CutC family.
       0.477
ARQ06967.1
Ferredoxin; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
     0.454
ARQ06615.1
Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the UPF0342 family.
 
     0.452
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.