STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sftADNA translocase SftA; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the FtsK/SpoIIIE/SftA family. (912 aa)    
Predicted Functional Partners:
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
  
 0.876
ARQ07460.1
Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
    0.835
pheT_2
Phenylalanine--tRNA ligase beta subunit; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.834
spo0C
Chromosome-partitioning protein Spo0J; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the ParB family.
  
  
 0.717
noc
Nucleoid occlusion protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the ParB family.
  
  
 0.699
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
  
 0.638
ARQ07456.1
Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
    0.613
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
  
  
 0.601
divIB
Cell division protein DivIB; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
   
 
 0.556
ARQ07210.1
ComEC family competence protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
  
 0.543
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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