STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARQ07706.12-oxoglutaramate amidase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (257 aa)    
Predicted Functional Partners:
gluD
NAD-specific glutamate dehydrogenase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.921
nadB
L-aspartate oxidase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
    
 0.916
dapL
LL-diaminopimelate aminotransferase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
 0.831
icd
Isocitrate dehydrogenase [NADP]; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
    
  0.830
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
  0.814
odhA_1
2-oxoglutarate dehydrogenase E1 component; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
     
  0.805
pckA
Phosphoenolpyruvate carboxykinase [ATP]; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
    
 0.804
korA
2-oxoglutarate oxidoreductase subunit KorA; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
 
  0.803
korB
2-oxoglutarate oxidoreductase subunit KorB; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
   
 
  0.803
cfiB_1
2-oxoglutarate carboxylase small subunit; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
     
 0.802
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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