STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARQ07882.1Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (397 aa)    
Predicted Functional Partners:
abgB
P-aminobenzoyl-glutamate hydrolase subunit B; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the peptidase M20A family.
      0.973
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
 0.912
accB_1
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.908
accB_2
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
 
 0.908
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
   0.902
xerC_2
Tyrosine recombinase XerC; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the 'phage' integrase family.
  
     0.764
ARQ06714.1
Bacterial membrane protein YfhO; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
     0.755
ARQ07846.1
Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
     0.748
ARQ06713.1
Bacterial membrane protein YfhO; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
     0.732
ARQ06260.1
Inhibitor of apoptosis-promoting Bax1; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
     0.721
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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