STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysKCysteine synthase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the cysteine synthase/cystathionine beta- synthase family. (310 aa)    
Predicted Functional Partners:
cysE
Serine acetyltransferase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
 0.994
mccB
Cystathionine gamma-lyase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
 0.976
cysS
Cysteine--tRNA ligase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.921
patB
Cystathionine beta-lyase PatB; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
    
 0.918
fccB
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
     
 0.901
luxS
S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.
  
 
 0.871
mdeA
Methionine gamma-lyase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
 
 0.850
sseA
3-mercaptopyruvate sulfurtransferase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
 
 0.845
cysM
Cysteine synthase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
 
0.835
ARQ06060.1
Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
   
 
 0.831
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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