STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mazGNucleoside triphosphate pyrophosphohydrolase/pyrophosphatase MazG; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (390 aa)    
Predicted Functional Partners:
hslR
Heat shock protein 15; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
    0.902
mfd_2
Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
     
 0.842
divIC
Cell division protein DivIC; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
 
     0.839
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
     
 0.839
ytgP_2
Putative cell division protein YtgP; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
  
    0.837
yugI_2
General stress protein 13; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
       0.575
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
     
 0.567
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
       0.556
hpt
Hypoxanthine-guanine phosphoribosyltransferase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
     0.525
malL
Oligo-1,6-glucosidase; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern.
     
 0.460
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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