STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
narTPutative nitrate transporter NarT. (765 aa)    
Predicted Functional Partners:
nasC_1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.994
nasA
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.972
nirB
Assimilatory nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.971
nirD
Assimilatory nitrite reductase [NAD(P)H] small subunit.
 
 
 0.935
narK
Nitrate transporter.
  
  
 
0.915
aioB
Arsenite oxidase subunit AioB.
 
   
 0.909
LuPra_01829
Nitronate monooxygenase.
  
 
  0.905
nrfH
Cytochrome c-type protein NrfH.
     
 0.902
nrfA
Nitrite reductase (cytochrome; ammonia-forming); Belongs to the cytochrome c-552 family.
     
  0.900
dmsB
DMSO reductase iron-sulfur subunit.
 
   
 0.879
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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