Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LuPra_01829 | narK | LuPra_01829 | LuPra_01522 | Nitronate monooxygenase. | Nitrate transporter. | 0.905 |
LuPra_01829 | narT | LuPra_01829 | LuPra_00134 | Nitronate monooxygenase. | Putative nitrate transporter NarT. | 0.905 |
LuPra_01829 | nasA | LuPra_01829 | LuPra_01519 | Nitronate monooxygenase. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.900 |
LuPra_01829 | nasC_1 | LuPra_01829 | LuPra_00133 | Nitronate monooxygenase. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.900 |
LuPra_01829 | nirB | LuPra_01829 | LuPra_01520 | Nitronate monooxygenase. | Assimilatory nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.900 |
LuPra_01829 | nirD | LuPra_01829 | LuPra_01521 | Nitronate monooxygenase. | Assimilatory nitrite reductase [NAD(P)H] small subunit. | 0.900 |
LuPra_01829 | nrfA | LuPra_01829 | LuPra_05653 | Nitronate monooxygenase. | Nitrite reductase (cytochrome; ammonia-forming); Belongs to the cytochrome c-552 family. | 0.900 |
LuPra_01829 | nrfH | LuPra_01829 | LuPra_05654 | Nitronate monooxygenase. | Cytochrome c-type protein NrfH. | 0.900 |
aioB | dmsB | LuPra_00131 | LuPra_00132 | Arsenite oxidase subunit AioB. | DMSO reductase iron-sulfur subunit. | 0.910 |
aioB | narT | LuPra_00131 | LuPra_00134 | Arsenite oxidase subunit AioB. | Putative nitrate transporter NarT. | 0.909 |
aioB | nasA | LuPra_00131 | LuPra_01519 | Arsenite oxidase subunit AioB. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.534 |
aioB | nasC_1 | LuPra_00131 | LuPra_00133 | Arsenite oxidase subunit AioB. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.909 |
dmsB | aioB | LuPra_00132 | LuPra_00131 | DMSO reductase iron-sulfur subunit. | Arsenite oxidase subunit AioB. | 0.910 |
dmsB | narT | LuPra_00132 | LuPra_00134 | DMSO reductase iron-sulfur subunit. | Putative nitrate transporter NarT. | 0.879 |
dmsB | nasA | LuPra_00132 | LuPra_01519 | DMSO reductase iron-sulfur subunit. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.783 |
dmsB | nasC_1 | LuPra_00132 | LuPra_00133 | DMSO reductase iron-sulfur subunit. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.956 |
dmsB | nrfA | LuPra_00132 | LuPra_05653 | DMSO reductase iron-sulfur subunit. | Nitrite reductase (cytochrome; ammonia-forming); Belongs to the cytochrome c-552 family. | 0.417 |
narK | LuPra_01829 | LuPra_01522 | LuPra_01829 | Nitrate transporter. | Nitronate monooxygenase. | 0.905 |
narK | narT | LuPra_01522 | LuPra_00134 | Nitrate transporter. | Putative nitrate transporter NarT. | 0.915 |
narK | nasA | LuPra_01522 | LuPra_01519 | Nitrate transporter. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.992 |
page 1 of 5