STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qbdA_2Quinohemoprotein alcohol dehydrogenase ADH IIB. (681 aa)    
Predicted Functional Partners:
fixN
Cytochrome c oxidase subunit; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.950
qgdA_2
Quinohemoprotein alcohol dehydrogenase ADH-IIG.
  
  
 
0.915
qbdA_1
Quinohemoprotein alcohol dehydrogenase ADH IIB.
  
  
 
0.907
LuPra_01092
Alcohol dehydrogenase.
   
 
 0.905
LuPra_02032
Alcohol dehydrogenase.
   
 
 0.905
yahK
Putative zinc-type alcohol dehydrogenase-like protein YahK.
   
 
 0.905
qbdA_4
Quinohemoprotein alcohol dehydrogenase ADH IIB.
  
  
 
0.904
dhaA
Haloalkane dehalogenase.
     
  0.900
LuPra_05287
PQQ-dependent catabolism-associated beta-propeller protein.
 
    0.795
LuPra_05297
40-residue YVTN family beta-propeller repeat.
 
    0.739
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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