STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpsDNA protection during starvation protein; Belongs to the Dps family. (167 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.872
tsaA
Putative peroxiredoxin.
  
  
 0.817
yvyD
SigL modulation protein.
  
    0.757
osmC_1
Peroxiredoxin OsmC.
 
  
 0.642
LuPra_00720
Zinc carboxypeptidase.
       0.618
LuPra_00627
OsmC-like protein.
  
  
 0.586
osmC_2
Peroxiredoxin OsmC.
  
  
 0.586
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.567
LuPra_01082
LysM domain/BON superfamily protein.
   
  
 0.556
LuPra_00376
Glutaredoxin-like domain protein.
  
  
 0.532
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.